Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10177 and 10178 are separated by 457 nucleotides10178 and 10179 are separated by 359 nucleotides10179 and 10180 are separated by 262 nucleotides10180 and 10181 are separated by 970 nucleotides mRNA_1809: 10177 - Hypothetical Protein, at 258,844 to 259,797 10177 mRNA_1810: 10178 - HMMPfam-Predicted SAM-dependent RNA methyltransferase-PF04252, at 260,255 to 261,213 10178 mRNA_1811: 10179 - HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657, at 261,573 to 264,889 10179 mRNA_1812: 10180 - Hypothetical Protein, at 265,152 to 268,202 10180 mRNA_1813: 10181 - K04352 RASA1, RASGAP Ras GTPase-activating protein 1, at 269,173 to 274,604 10181
Group Condition mRNA_1809 mRNA_1810 mRNA_1811 mRNA_1812 mRNA_1813
10177 10178 10179 10180 10181
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.8 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.7 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 -0.5 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.5 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 -0.8 +0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 -0.4 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.9 +0.2 +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.5 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 +0.2 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.5 -0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.5 +0.3 -0.0 +0.1
growth on ypd YPD N.D. -0.1 +0.6 -0.2 -0.5
growth on oleic acid YNB Glucose N.D. -0.1 -0.2 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.0 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.0 -0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.3 -0.3 +0.3
auxotrophy Dropout Complete N.D. +0.2 +0.4 -0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 +0.6 -0.0 +0.1
auxotrophy YNB Glucose N.D. +0.2 +0.8 -0.3 +0.1
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