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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10179 and 10180 are separated by 262 nucleotides
10180 and 10181 are separated by 970 nucleotides
10181 and 10182 are separated by 561 nucleotides
10182 and 10183 are separated by 1466 nucleotides
mRNA_1811: 10179 - HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657, at 261,573 to 264,889
10179
mRNA_1812: 10180 - Hypothetical Protein, at 265,152 to 268,202
10180
mRNA_1813: 10181 - K04352 RASA1, RASGAP Ras GTPase-activating protein 1, at 269,173 to 274,604
10181
mRNA_1814: 10182 - K00858 ppnK, NADK NAD+ kinase, at 275,166 to 278,698
10182
mRNA_1815: 10183 - K20777 EXD2 exonuclease 3'-5' domain-containing protein 2, at 280,165 to 281,761
10183
Group
Condition
mRNA
_1811
mRNA
_1812
mRNA
_1813
mRNA
_1814
mRNA
_1815
10179
10180
10181
10182
10183
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.1
-0.1
-1.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.1
-0.1
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.0
-0.2
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.0
+0.1
-0.7
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
+0.1
-0.2
+0.0
growth on ypd
YPD
+0.6
-0.2
-0.5
-0.3
+0.2
growth on oleic acid
YNB Glucose
-0.2
+0.1
+0.2
-0.4
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.3
-0.2
+0.7
+0.2
auxotrophy
Dropout Complete
+0.4
-0.2
+0.0
-0.6
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.1
-0.2
+0.4
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.0
+0.0
+0.6
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
-0.1
-0.1
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.3
+0.3
-0.4
+0.3
growth on ricinoleic acid
YNB Glucose
-0.5
+0.2
+0.1
+0.0
+0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.2
+0.4
+0.4
+0.1
auxotrophy
YNB Glucose
+0.8
-0.3
+0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
+0.2
+0.4
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.2
-0.1
+0.3
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
+0.2
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.0
+0.1
+0.4
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.0
+0.1
+0.3
+0.2
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