Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10180 and 10181 are separated by 970 nucleotides
10181 and 10182 are separated by 561 nucleotides
10182 and 10183 are separated by 1466 nucleotides
10183 and 10184 are separated by 739 nucleotides
mRNA_1812: 10180 - Hypothetical Protein, at 265,152 to 268,202
10180
mRNA_1813: 10181 - K04352 RASA1, RASGAP Ras GTPase-activating protein 1, at 269,173 to 274,604
10181
mRNA_1814: 10182 - K00858 ppnK, NADK NAD+ kinase, at 275,166 to 278,698
10182
mRNA_1815: 10183 - K20777 EXD2 exonuclease 3'-5' domain-containing protein 2, at 280,165 to 281,761
10183
mRNA_1816: 10184 - K08178 JEN MFS transporter, SHS family, lactate transporter, at 282,501 to 284,889
10184
Group
Condition
mRNA
_1812
mRNA
_1813
mRNA
_1814
mRNA
_1815
mRNA
_1816
10180
10181
10182
10183
10184
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
-1.3
-0.4
+0.2
growth on ypd
YPD
-0.2
-0.5
-0.3
+0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
-0.7
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
+0.1
-0.2
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
+0.0
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.1
-0.4
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.2
-0.4
+0.3
-0.3
auxotrophy
YNB Glucose
-0.3
+0.1
-0.3
+0.1
+0.4
auxotrophy
Dropout Complete
-0.2
+0.0
-0.6
+0.3
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.2
+0.7
+0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.3
-0.4
+0.3
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.1
+0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
+0.2
+0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.0
+0.6
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.4
+0.4
+0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.1
+0.3
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
+0.3
+0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.1
+0.4
+0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
+0.4
+0.5
+0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
+0.0
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
+0.1
+0.6
-0.3
remove
mRNA_1812
plot
remove
mRNA_1813
plot
remove
mRNA_1814
remove
mRNA_1815
plot
remove
mRNA_1816
plot