Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10180 and 10181 are separated by 970 nucleotides10181 and 10182 are separated by 561 nucleotides10182 and 10183 are separated by 1466 nucleotides10183 and 10184 are separated by 739 nucleotides mRNA_1812: 10180 - Hypothetical Protein, at 265,152 to 268,202 10180 mRNA_1813: 10181 - K04352 RASA1, RASGAP Ras GTPase-activating protein 1, at 269,173 to 274,604 10181 mRNA_1814: 10182 - K00858 ppnK, NADK NAD+ kinase, at 275,166 to 278,698 10182 mRNA_1815: 10183 - K20777 EXD2 exonuclease 3'-5' domain-containing protein 2, at 280,165 to 281,761 10183 mRNA_1816: 10184 - K08178 JEN MFS transporter, SHS family, lactate transporter, at 282,501 to 284,889 10184
Group Condition mRNA_1812 mRNA_1813 mRNA_1814 mRNA_1815 mRNA_1816
10180 10181 10182 10183 10184
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -1.3 -0.4 +0.2
growth on ypd YPD -0.2 -0.5 -0.3 +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 -0.7 -0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.3 +0.1 -0.2 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 +0.0 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 -0.4 -0.1 +0.1
growth on oleic acid YNB Glucose +0.1 +0.2 -0.4 +0.3 -0.3
auxotrophy YNB Glucose -0.3 +0.1 -0.3 +0.1 +0.4
auxotrophy Dropout Complete -0.2 +0.0 -0.6 +0.3 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.2 +0.7 +0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.3 -0.4 +0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -0.1 +0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 +0.2 +0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 +0.6 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.4 +0.4 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 +0.3 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.3 +0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 +0.4 +0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 +0.4 +0.5 +0.1
growth on ricinoleic acid YNB Glucose +0.2 +0.1 +0.0 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 +0.1 +0.6 -0.3
remove
mRNA_1812
plot
remove
mRNA_1813
plot
remove
mRNA_1814
remove
mRNA_1815
plot
remove
mRNA_1816
plot