Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10183 and 10184 are separated by 739 nucleotides10184 and 10185 are separated by 357 nucleotides10185 and 10186 are separated by 358 nucleotides10186 and 10187 are separated by 284 nucleotides mRNA_1815: 10183 - K20777 EXD2 exonuclease 3'-5' domain-containing protein 2, at 280,165 to 281,761 10183 mRNA_1816: 10184 - K08178 JEN MFS transporter, SHS family, lactate transporter, at 282,501 to 284,889 10184 mRNA_1817: 10185 - HMMPfam-Ring finger domain-PF13639,ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966,SUPERFAMILY--SSF57850, at 285,247 to 286,558 10185 mRNA_1818: 10186 - Hypothetical Protein, at 286,917 to 287,591 10186 mRNA_1819: 10187 - K09215 OSR, ODD odd-skipped, at 287,876 to 290,451 10187
Group Condition mRNA_1815 mRNA_1816 mRNA_1817 mRNA_1818 mRNA_1819
10183 10184 10185 10186 10187
auxotrophy YNB Glucose +0.1 +0.4 -2.6 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 -2.4 -0.1 -0.3
growth on oleic acid YNB Oleic Acid +0.0 -0.3 -1.4 -0.0 -0.1
auxotrophy Dropout Complete +0.3 +0.3 -2.2 +0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -1.4 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.3 -1.9 -0.2 -0.1
growth on oleic acid YNB Glucose +0.3 -0.3 -0.9 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.1 -1.9 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.0 -0.7 -0.1 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 -1.7 +0.5 +0.2
growth on ricinoleic acid YNB Glucose +0.5 +0.2 -1.8 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 +0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 -0.4 +0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 -0.0 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 -0.4 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.5 +0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.1 -0.9 -0.1 +0.1
growth on ypd YPD +0.2 -0.4 +0.3 +0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.3 -0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.1 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.2 -0.4 +0.1 +0.1
remove
mRNA_1815
plot
remove
mRNA_1816
plot
remove
mRNA_1817
remove
mRNA_1818
plot
remove
mRNA_1819
plot