Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10188 and 10189 are separated by 32 nucleotides
10189 and 10190 are separated by 697 nucleotides
10190 and 10191 are separated by 1982 nucleotides
10191 and 10192 are separated by 294 nucleotides
mRNA_1820: 10188 - Hypothetical Protein, at 290,979 to 291,681
10188
mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291,714 to 294,112
10189
mRNA_1822: 10190 - KOG0627 Heat shock transcription factor, at 294,810 to 296,545
10190
mRNA_1823: 10191 - KOG3783 Uncharacterized conserved protein, at 298,528 to 301,287
10191
mRNA_1824: 10192 - Hypothetical Protein, at 301,582 to 303,988
10192
Group
Condition
mRNA
_1820
mRNA
_1821
mRNA
_1822
mRNA
_1823
mRNA
_1824
10188
10189
10190
10191
10192
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.5
-0.4
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.0
-0.7
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.4
-0.5
-0.3
+0.0
auxotrophy
Dropout Complete
+0.1
+0.0
-0.4
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.2
-0.4
-0.5
-0.5
growth on oleic acid
YNB Glucose
-0.1
-0.0
-0.2
+0.5
-0.4
growth on ypd
YPD
-0.1
+0.3
+0.0
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
-0.1
+0.1
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
+0.0
+0.2
-0.3
auxotrophy
YNB Glucose
+0.2
+0.1
-0.2
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
+0.0
+0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.1
+0.1
+0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.0
-0.2
-0.1
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
-0.1
+0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.0
-0.2
+0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
+0.3
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
+0.0
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.6
-0.2
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.4
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.5
-0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
+0.3
+0.1
+0.3
remove
mRNA_1820
plot
remove
mRNA_1821
plot
remove
mRNA_1822
remove
mRNA_1823
plot
remove
mRNA_1824
plot