Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10189 and 10190 are separated by 697 nucleotides10190 and 10191 are separated by 1982 nucleotides10191 and 10192 are separated by 294 nucleotides10192 and 10193 are separated by 659 nucleotides mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291,714 to 294,112 10189 mRNA_1822: 10190 - KOG0627 Heat shock transcription factor, at 294,810 to 296,545 10190 mRNA_1823: 10191 - KOG3783 Uncharacterized conserved protein, at 298,528 to 301,287 10191 mRNA_1824: 10192 - Hypothetical Protein, at 301,582 to 303,988 10192 mRNA_1825: 10193 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 304,648 to 308,455 10193
Group Condition mRNA_1821 mRNA_1822 mRNA_1823 mRNA_1824 mRNA_1825
10189 10190 10191 10192 10193
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.5 -0.3 +0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.4 -0.3 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.2 +0.2 +0.1 -1.4
auxotrophy Dropout Complete +0.0 -0.4 -0.3 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.4 -0.5 -0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 +0.2 -0.5 -0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.7 -0.2 -0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.3 -0.1 +0.1 -0.6 -0.5
auxotrophy YNB Glucose +0.1 -0.2 -0.0 -0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.0 +0.3 -0.3 -0.4
growth on oleic acid YNB Glucose -0.0 -0.2 +0.5 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 +0.0 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.0 +0.2 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.1 +0.4 -0.1
growth on ypd YPD +0.3 +0.0 -0.2 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.0 +0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.2 +0.2 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.3 +0.1 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.1 +0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.5 -0.2 +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.4 +0.1 +0.2 +0.1
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