Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10193 and 10194 are separated by 224 nucleotides10194 and 10195 are separated by 1252 nucleotides10195 and 10196 are separated by 111 nucleotides10196 and 10197 are separated by 356 nucleotides mRNA_1825: 10193 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 304,648 to 308,455 10193 mRNA_1826: 10194 - Hypothetical Protein, at 308,680 to 309,068 10194 mRNA_1827: 10195 - KOG3958 Putative dynamitin, at 310,321 to 312,024 10195 mRNA_1828: 10196 - Hypothetical Protein, at 312,136 to 314,530 10196 mRNA_1829: 10197 - K20238 E2.1.1.317 sphingolipid C9-methyltransferase, at 314,887 to 317,031 10197
Group Condition mRNA_1825 mRNA_1826 mRNA_1827 mRNA_1828 mRNA_1829
10193 10194 10195 10196 10197
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.3 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.5 N.D. N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.3 N.D. N.D. -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 N.D. N.D. -0.9
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 N.D. N.D. -0.2
growth on oleic acid YNB Glucose -0.2 -0.6 N.D. N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.6 N.D. N.D. +0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 N.D. N.D. -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 N.D. N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 N.D. N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 N.D. N.D. -0.3
auxotrophy YNB Glucose -0.1 -0.1 N.D. N.D. -0.1
auxotrophy Dropout Complete -0.2 -0.3 N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 N.D. N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.4 -0.5 N.D. N.D. +0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.5 -0.6 N.D. N.D. +1.1
growth on ypd YPD +0.1 -0.4 N.D. N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 N.D. N.D. +0.0
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