Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10193 and 10194 are separated by 224 nucleotides
10194 and 10195 are separated by 1252 nucleotides
10195 and 10196 are separated by 111 nucleotides
10196 and 10197 are separated by 356 nucleotides
mRNA_1825: 10193 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 304,648 to 308,455
10193
mRNA_1826: 10194 - Hypothetical Protein, at 308,680 to 309,068
10194
mRNA_1827: 10195 - KOG3958 Putative dynamitin, at 310,321 to 312,024
10195
mRNA_1828: 10196 - Hypothetical Protein, at 312,136 to 314,530
10196
mRNA_1829: 10197 - K20238 E2.1.1.317 sphingolipid C9-methyltransferase, at 314,887 to 317,031
10197
Group
Condition
mRNA
_1825
mRNA
_1826
mRNA
_1827
mRNA
_1828
mRNA
_1829
10193
10194
10195
10196
10197
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
-0.3
N.D.
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.5
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
N.D.
N.D.
-1.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
N.D.
N.D.
-0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
N.D.
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.4
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
N.D.
N.D.
-0.2
growth on oleic acid
YNB Glucose
-0.2
-0.6
N.D.
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
-0.6
N.D.
N.D.
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
N.D.
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
N.D.
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.2
N.D.
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.0
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose
-0.1
-0.1
N.D.
N.D.
-0.1
auxotrophy
Dropout Complete
-0.2
-0.3
N.D.
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
N.D.
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
-0.4
-0.5
N.D.
N.D.
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.1
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.5
-0.6
N.D.
N.D.
+1.1
growth on ypd
YPD
+0.1
-0.4
N.D.
N.D.
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
N.D.
N.D.
+0.0
remove
mRNA_1825
plot
remove
mRNA_1826
plot
remove
mRNA_1827
remove
mRNA_1828
plot
remove
mRNA_1829
plot