Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10199 and 10200 are separated by 450 nucleotides
10200 and 10201 are separated by 567 nucleotides
10201 and 10202 are separated by 176 nucleotides
10202 and 10203 are separated by 380 nucleotides
mRNA_1831: 10199 - KOG3274 Uncharacterized conserved protein, AMMECR1, at 318,985 to 319,920
10199
mRNA_1832: 10200 - K11188 PRDX6 peroxiredoxin 6, 1-Cys peroxiredoxin, at 320,371 to 321,858
10200
mRNA_1833: 10201 - Hypothetical Protein, at 322,426 to 322,877
10201
mRNA_1834: 10202 - Hypothetical Protein, at 323,054 to 324,268
10202
mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324,649 to 327,501
10203
Group
Condition
mRNA
_1831
mRNA
_1832
mRNA
_1833
mRNA
_1834
mRNA
_1835
10199
10200
10201
10202
10203
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
+0.0
N.D.
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.2
N.D.
+0.4
-1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.4
N.D.
-0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.5
-0.1
N.D.
+0.2
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.2
N.D.
+0.3
-1.3
growth on oleic acid
YNB Glucose
-0.1
+0.2
N.D.
+0.1
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
+0.1
N.D.
+0.8
-0.9
growth on ricinoleic acid
YNB Glucose
-0.2
+0.2
N.D.
+0.3
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.2
N.D.
+0.4
-1.7
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.3
N.D.
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.8
N.D.
+0.1
-1.1
auxotrophy
Dropout Complete
+0.4
+0.3
N.D.
+0.1
-0.9
growth on ypd
YPD
+0.1
-0.0
N.D.
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
-0.2
N.D.
+0.2
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.5
N.D.
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.5
N.D.
+0.2
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
+0.4
N.D.
+0.7
-0.0
auxotrophy
YNB Glucose
+0.3
+0.6
N.D.
+0.4
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
N.D.
+1.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.4
N.D.
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.1
N.D.
+0.6
+0.3
remove
mRNA_1831
plot
remove
mRNA_1832
plot
remove
mRNA_1833
remove
mRNA_1834
plot
remove
mRNA_1835
plot