Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10202 and 10203 are separated by 380 nucleotides10203 and 10204 are separated by 1661 nucleotides10204 and 10205 are separated by 495 nucleotides10205 and 10206 are separated by 433 nucleotides mRNA_1834: 10202 - Hypothetical Protein, at 323,054 to 324,268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324,649 to 327,501 10203 mRNA_1836: 10204 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 329,163 to 331,495 10204 mRNA_1837: 10205 - K00281 GLDC, gcvP glycine dehydrogenase, at 331,991 to 335,971 10205 mRNA_1838: 10206 - K04486 E3.1.3.15B histidinol-phosphatase (PHP family), at 336,405 to 337,627 10206
Group Condition mRNA_1834 mRNA_1835 mRNA_1836 mRNA_1837 mRNA_1838
10202 10203 10204 10205 10206
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -1.7 -0.3 -1.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -1.3 -0.2 -0.9 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 -0.1 -0.9 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -1.0 -0.0 -0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.0 -0.8 N.D.
growth on ricinoleic acid YNB Glucose +0.3 -1.0 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.3 -0.2 -0.4 N.D.
auxotrophy YNB Glucose +0.4 -1.0 -0.4 -0.1 N.D.
growth on oleic acid YNB Glucose +0.1 -1.0 -0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -1.1 -0.0 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.7 -0.0 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.9 -0.3 +0.3 N.D.
auxotrophy Dropout Complete +0.1 -0.9 -0.0 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 -0.9 +0.3 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.7 -0.2 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.3 -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.0 +0.1 -0.5 -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.0 -0.1 -0.2 N.D.
growth on ypd YPD -0.2 +0.3 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.3 -0.1 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.5 -0.2 +0.1 N.D.
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