Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10204 and 10205 are separated by 495 nucleotides10205 and 10206 are separated by 433 nucleotides10206 and 10207 are separated by 100 nucleotides10207 and 10208 are separated by 385 nucleotides mRNA_1836: 10204 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 329,163 to 331,495 10204 mRNA_1837: 10205 - K00281 GLDC, gcvP glycine dehydrogenase, at 331,991 to 335,971 10205 mRNA_1838: 10206 - K04486 E3.1.3.15B histidinol-phosphatase (PHP family), at 336,405 to 337,627 10206 mRNA_1839: 10207 - Hypothetical Protein, at 337,728 to 339,625 10207 mRNA_1840: 10208 - Hypothetical Protein, at 340,011 to 340,722 10208
Group Condition mRNA_1836 mRNA_1837 mRNA_1838 mRNA_1839 mRNA_1840
10204 10205 10206 10207 10208
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 N.D. -0.1 -2.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.8 N.D. -0.2 -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.4 N.D. +0.0 -1.1
growth on ypd YPD +0.2 +0.1 N.D. -0.3 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.9 N.D. -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.9 N.D. +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -1.1 N.D. +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.7 N.D. +0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.5 N.D. +0.1 +0.0
auxotrophy YNB Glucose -0.4 -0.1 N.D. -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.8 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.2 N.D. -0.2 -0.5
auxotrophy Dropout Complete -0.0 +0.2 N.D. -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.3 N.D. -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 N.D. +0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 N.D. +0.5 -0.5
growth on oleic acid YNB Oleic Acid -0.0 -0.2 N.D. +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 N.D. +0.1 +0.1
growth on oleic acid YNB Glucose -0.1 +0.1 N.D. -0.1 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 N.D. +0.3 +0.8
remove
mRNA_1836
plot
remove
mRNA_1837
plot
remove
mRNA_1838
remove
mRNA_1839
plot
remove
mRNA_1840
plot