Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10206 and 10207 are separated by 100 nucleotides10207 and 10208 are separated by 385 nucleotides10208 and 10209 are separated by 2033 nucleotides10209 and 10210 are separated by 579 nucleotides mRNA_1838: 10206 - K04486 E3.1.3.15B histidinol-phosphatase (PHP family), at 336,405 to 337,627 10206 mRNA_1839: 10207 - Hypothetical Protein, at 337,728 to 339,625 10207 mRNA_1840: 10208 - Hypothetical Protein, at 340,011 to 340,722 10208 mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342,756 to 344,236 10209 mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344,816 to 347,199 10210
Group Condition mRNA_1838 mRNA_1839 mRNA_1840 mRNA_1841 mRNA_1842
10206 10207 10208 10209 10210
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -2.3 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -1.2 -0.5 -0.4
growth on ypd YPD N.D. -0.3 -1.7 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -1.1 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.1 -1.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.3 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.5 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.5 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.1 -0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.4 +0.2 +0.0
auxotrophy YNB Glucose N.D. -0.3 -0.0 +0.2 -0.0
auxotrophy Dropout Complete N.D. -0.4 -0.2 +0.4 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.0 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 -0.4 +0.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.0 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.5 -0.5 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.0 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 +0.1 +0.2 +0.2
growth on oleic acid YNB Glucose N.D. -0.1 +0.6 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.8 +0.1 +0.1
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