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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10207 and 10208 are separated by 385 nucleotides
10208 and 10209 are separated by 2033 nucleotides
10209 and 10210 are separated by 579 nucleotides
10210 and 10211 are separated by 322 nucleotides
mRNA_1839: 10207 - Hypothetical Protein, at 337,728 to 339,625
10207
mRNA_1840: 10208 - Hypothetical Protein, at 340,011 to 340,722
10208
mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342,756 to 344,236
10209
mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344,816 to 347,199
10210
mRNA_1843: 10211 - Hypothetical Protein, at 347,522 to 353,659
10211
Group
Condition
mRNA
_1839
mRNA
_1840
mRNA
_1841
mRNA
_1842
mRNA
_1843
10207
10208
10209
10210
10211
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-1.2
-0.5
-0.4
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-2.3
-0.4
-0.2
+0.9
growth on ypd
YPD
-0.3
-1.7
+0.1
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-1.1
+0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.1
-1.1
+0.0
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.3
-0.3
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.5
+0.2
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-0.1
-0.2
+0.2
auxotrophy
YNB Glucose
-0.3
-0.0
+0.2
-0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.5
-0.1
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
+0.2
+0.0
-0.0
auxotrophy
Dropout Complete
-0.4
-0.2
+0.4
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
-0.4
-0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.4
+0.1
+0.1
-0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.0
+0.0
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
+0.2
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.5
-0.5
+0.0
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.0
-0.1
+0.4
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.1
+0.2
+0.2
+0.1
growth on oleic acid
YNB Glucose
-0.1
+0.6
+0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.8
+0.1
+0.1
+0.1
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