Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10208 and 10209 are separated by 2033 nucleotides
10209 and 10210 are separated by 579 nucleotides
10210 and 10211 are separated by 322 nucleotides
10211 and 10212 are separated by 230 nucleotides
mRNA_1840: 10208 - Hypothetical Protein, at 340,011 to 340,722
10208
mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342,756 to 344,236
10209
mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344,816 to 347,199
10210
mRNA_1843: 10211 - Hypothetical Protein, at 347,522 to 353,659
10211
mRNA_1844: 10212 - K16066 ydfG 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase, at 353,890 to 355,492
10212
Group
Condition
mRNA
_1840
mRNA
_1841
mRNA
_1842
mRNA
_1843
mRNA
_1844
10208
10209
10210
10211
10212
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
-0.5
-0.4
+0.2
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
-2.3
-0.4
-0.2
+0.9
+0.4
growth on ypd
YPD
-1.7
+0.1
-0.0
+0.1
+0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.4
+0.1
+0.1
-0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.4
-0.1
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.1
+0.1
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-1.1
+0.0
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.1
+0.3
-0.0
-0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.4
+0.2
+0.0
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+0.2
-0.0
-0.1
+0.4
growth on oleic acid
YNB Oleic Acid
-0.0
+0.0
-0.1
-0.0
+0.3
auxotrophy
Dropout Complete
-0.2
+0.4
+0.1
-0.1
-0.0
auxotrophy
YNB Glucose
-0.0
+0.2
-0.0
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.1
+0.4
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.3
-0.3
+0.1
+1.4
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.0
+0.2
+0.2
+0.9
growth on ricinoleic acid
YNB Glucose
-0.0
+0.2
+0.1
-0.0
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
-0.2
+0.2
+1.4
growth on oleic acid
YNB Glucose
+0.6
+0.1
+0.2
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.8
+0.1
+0.1
+0.1
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
+0.2
+0.1
+1.4
remove
mRNA_1840
plot
remove
mRNA_1841
plot
remove
mRNA_1842
remove
mRNA_1843
plot
remove
mRNA_1844
plot