Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10208 and 10209 are separated by 2033 nucleotides10209 and 10210 are separated by 579 nucleotides10210 and 10211 are separated by 322 nucleotides10211 and 10212 are separated by 230 nucleotides mRNA_1840: 10208 - Hypothetical Protein, at 340,011 to 340,722 10208 mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342,756 to 344,236 10209 mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344,816 to 347,199 10210 mRNA_1843: 10211 - Hypothetical Protein, at 347,522 to 353,659 10211 mRNA_1844: 10212 - K16066 ydfG 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase, at 353,890 to 355,492 10212
Group Condition mRNA_1840 mRNA_1841 mRNA_1842 mRNA_1843 mRNA_1844
10208 10209 10210 10211 10212
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.5 -0.4 +0.2 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 -0.4 -0.2 +0.9 +0.4
growth on ypd YPD -1.7 +0.1 -0.0 +0.1 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 +0.1 -0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.4 -0.1 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.1 +0.1 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -1.1 +0.0 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.1 +0.3 -0.0 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.2 +0.0 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.2 -0.0 -0.1 +0.4
growth on oleic acid YNB Oleic Acid -0.0 +0.0 -0.1 -0.0 +0.3
auxotrophy Dropout Complete -0.2 +0.4 +0.1 -0.1 -0.0
auxotrophy YNB Glucose -0.0 +0.2 -0.0 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.1 +0.4 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 -0.3 +0.1 +1.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.0 +0.2 +0.2 +0.9
growth on ricinoleic acid YNB Glucose -0.0 +0.2 +0.1 -0.0 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 -0.2 +0.2 +1.4
growth on oleic acid YNB Glucose +0.6 +0.1 +0.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 +0.1 +0.1 +0.1 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 +0.2 +0.1 +1.4
remove
mRNA_1840
plot
remove
mRNA_1841
plot
remove
mRNA_1842
remove
mRNA_1843
plot
remove
mRNA_1844
plot