Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10212 and 10213 are separated by 493 nucleotides10213 and 10214 are separated by 244 nucleotides10214 and 10215 are separated by 575 nucleotides10215 and 10216 are separated by 640 nucleotides mRNA_1844: 10212 - K16066 ydfG 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase, at 353,890 to 355,492 10212 mRNA_1845: 10213 - K06127 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, at 355,986 to 356,917 10213 mRNA_1846: 10214 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 357,162 to 359,735 10214 mRNA_1847: 10215 - BLAST GDP-fucose protein O-fucosyltransferase [Rhizopogon v..., at 360,311 to 362,309 10215 mRNA_1848: 10216 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 362,950 to 364,987 10216
Group Condition mRNA_1844 mRNA_1845 mRNA_1846 mRNA_1847 mRNA_1848
10212 10213 10214 10215 10216
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.3 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. +0.0 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 N.D. +0.5 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. -0.2 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.2 +0.0 -0.1
auxotrophy Dropout Complete -0.0 N.D. +0.4 +0.0 -0.2
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.0 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.5 +0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. -0.0 -0.3 +0.1
growth on oleic acid YNB Glucose +0.4 N.D. -0.0 -0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.5 +0.3 -0.2
growth on ypd YPD +0.6 N.D. +0.0 +0.2 -0.2
auxotrophy YNB Glucose +0.3 N.D. +0.5 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 N.D. +0.7 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.6 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.9 N.D. +0.1 -0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +1.4 N.D. +0.2 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 N.D. +0.5 +0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.7 N.D. +0.9 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.4 N.D. +0.9 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +1.4 N.D. +0.9 +0.2 -0.1
remove
mRNA_1844
plot
remove
mRNA_1845
plot
remove
mRNA_1846
remove
mRNA_1847
plot
remove
mRNA_1848
plot