Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10217 and 10218 are separated by 1084 nucleotides10218 and 10219 are separated by 721 nucleotides10219 and 10220 are separated by 82 nucleotides10220 and 10221 are separated by 511 nucleotides mRNA_1849: 10217 - Hypothetical Protein, at 365,239 to 367,490 10217 mRNA_1850: 10218 - K00311 ETFDH electron-transferring-flavoprotein dehydrogenase, at 368,575 to 371,026 10218 mRNA_1851: 10219 - BLAST cell wall surface anchor family protein [Moniliop..., at 371,748 to 376,200 10219 mRNA_1852: 10220 - K06133 LYS5, acpT 4'-phosphopantetheinyl transferase, at 376,283 to 377,328 10220 mRNA_1853: 10221 - KOG4147 Uncharacterized conserved protein, at 377,840 to 378,489 10221
Group Condition mRNA_1849 mRNA_1850 mRNA_1851 mRNA_1852 mRNA_1853
10217 10218 10219 10220 10221
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -3.7 +0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 -2.5 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -2.3 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -1.1 +0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 -0.4 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -1.2 +0.1 N.D. N.D.
auxotrophy YNB Glucose -0.0 -0.6 -0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -1.0 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.3 -0.3 N.D. N.D.
growth on oleic acid YNB Glucose -0.0 -0.7 +0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.5 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.7 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.4 +0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.4 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.5 -0.2 N.D. N.D.
growth on ypd YPD -0.1 -0.2 +0.3 N.D. N.D.
auxotrophy Dropout Complete +0.0 +0.1 +0.0 N.D. N.D.
remove
mRNA_1849
plot
remove
mRNA_1850
plot
remove
mRNA_1851
remove
mRNA_1852
plot
remove
mRNA_1853
plot