Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10220 and 10221 are separated by 511 nucleotides
10221 and 10222 are separated by 161 nucleotides
10222 and 10223 are separated by 409 nucleotides
10223 and 10224 are separated by 184 nucleotides
mRNA_1852: 10220 - K06133 LYS5, acpT 4'-phosphopantetheinyl transferase, at 376,283 to 377,328
10220
mRNA_1853: 10221 - KOG4147 Uncharacterized conserved protein, at 377,840 to 378,489
10221
mRNA_1854: 10222 - Hypothetical Protein, at 378,651 to 380,549
10222
mRNA_1855: 10223 - BLAST secreted protein [Moesziomyces antarcticus], at 380,959 to 382,150
10223
mRNA_1856: 10224 - K10863 APTX aprataxin, at 382,335 to 383,661
10224
Group
Condition
mRNA
_1852
mRNA
_1853
mRNA
_1854
mRNA
_1855
mRNA
_1856
10220
10221
10222
10223
10224
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.0
-0.8
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.1
-0.4
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.4
-0.2
-0.2
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.2
-0.4
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.0
-0.3
-0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.2
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.0
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.0
+0.3
-0.8
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.1
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.1
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.2
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.0
-0.0
-0.2
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.0
-0.0
-0.1
auxotrophy
YNB Glucose
N.D.
N.D.
+0.1
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.0
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.0
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.1
+0.2
+0.2
growth on ypd
YPD
N.D.
N.D.
+0.1
+0.8
+0.2
remove
mRNA_1852
plot
remove
mRNA_1853
plot
remove
mRNA_1854
remove
mRNA_1855
plot
remove
mRNA_1856
plot