Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10224 and 10225 are separated by 288 nucleotides
10225 and 10226 are separated by 712 nucleotides
10226 and 10227 are separated by 248 nucleotides
10227 and 10228 are separated by 271 nucleotides
mRNA_1856: 10224 - K10863 APTX aprataxin, at 382,335 to 383,661
10224
mRNA_1857: 10225 - KOG2533 Permease of the major facilitator superfamily, at 383,950 to 386,547
10225
mRNA_1858: 10226 - K19245 JLP1 sulfonate dioxygenase, at 387,260 to 388,608
10226
mRNA_1859: 10227 - SUPERFAMILY--SSF57997, at 388,857 to 391,098
10227
mRNA_1860: 10228 - K02259 COX15 cytochrome c oxidase assembly protein subunit 15, at 391,370 to 393,300
10228
Group
Condition
mRNA
_1856
mRNA
_1857
mRNA
_1858
mRNA
_1859
mRNA
_1860
10224
10225
10226
10227
10228
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.6
-0.9
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.8
-0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
-0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.1
+0.1
+0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.4
+0.2
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
+0.2
-0.4
N.D.
growth on oleic acid
YNB Glucose
-0.2
+0.1
-0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.5
+0.5
-0.2
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.6
-0.7
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.3
+0.0
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+0.4
-0.1
+0.3
N.D.
auxotrophy
Dropout Complete
-0.2
-0.1
+0.3
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
+0.0
+0.1
-0.1
N.D.
growth on ypd
YPD
+0.2
-0.4
+0.1
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
-0.2
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.2
+0.3
-0.2
N.D.
auxotrophy
YNB Glucose
-0.0
-0.2
+0.5
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.2
+0.4
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
+0.3
+0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
+0.5
+0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.4
+0.5
+0.2
N.D.
remove
mRNA_1856
plot
remove
mRNA_1857
plot
remove
mRNA_1858
remove
mRNA_1859
plot
remove
mRNA_1860
plot