Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10225 and 10226 are separated by 712 nucleotides10226 and 10227 are separated by 248 nucleotides10227 and 10228 are separated by 271 nucleotides10228 and 10229 are separated by 141 nucleotides mRNA_1857: 10225 - KOG2533 Permease of the major facilitator superfamily, at 383,950 to 386,547 10225 mRNA_1858: 10226 - K19245 JLP1 sulfonate dioxygenase, at 387,260 to 388,608 10226 mRNA_1859: 10227 - SUPERFAMILY--SSF57997, at 388,857 to 391,098 10227 mRNA_1860: 10228 - K02259 COX15 cytochrome c oxidase assembly protein subunit 15, at 391,370 to 393,300 10228 mRNA_1861: 10229 - KOG3348 BolA (bacterial stress-induced morphogen)-related protein, at 393,442 to 393,978 10229
Group Condition mRNA_1857 mRNA_1858 mRNA_1859 mRNA_1860 mRNA_1861
10225 10226 10227 10228 10229
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.2 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 +0.1 N.D. N.D.
growth on ypd YPD -0.4 +0.1 +0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.0 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 -0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.1 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.7 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 -0.2 +0.2 N.D. N.D.
auxotrophy Dropout Complete -0.1 +0.3 -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 -0.0 N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.5 -0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.5 -0.2 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.1 +0.3 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.5 +0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.5 +0.2 N.D. N.D.
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