Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10225 and 10226 are separated by 712 nucleotides
10226 and 10227 are separated by 248 nucleotides
10227 and 10228 are separated by 271 nucleotides
10228 and 10229 are separated by 141 nucleotides
mRNA_1857: 10225 - KOG2533 Permease of the major facilitator superfamily, at 383,950 to 386,547
10225
mRNA_1858: 10226 - K19245 JLP1 sulfonate dioxygenase, at 387,260 to 388,608
10226
mRNA_1859: 10227 - SUPERFAMILY--SSF57997, at 388,857 to 391,098
10227
mRNA_1860: 10228 - K02259 COX15 cytochrome c oxidase assembly protein subunit 15, at 391,370 to 393,300
10228
mRNA_1861: 10229 - KOG3348 BolA (bacterial stress-induced morphogen)-related protein, at 393,442 to 393,978
10229
Group
Condition
mRNA
_1857
mRNA
_1858
mRNA
_1859
mRNA
_1860
mRNA
_1861
10225
10226
10227
10228
10229
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.9
+0.0
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.2
-0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.2
+0.1
N.D.
N.D.
growth on ypd
YPD
-0.4
+0.1
+0.1
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.2
-0.0
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.2
-0.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.0
+0.2
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.3
-0.2
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
-0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.7
+0.1
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.1
-0.2
+0.2
N.D.
N.D.
auxotrophy
Dropout Complete
-0.1
+0.3
-0.2
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.4
-0.0
N.D.
N.D.
auxotrophy
YNB Glucose
-0.2
+0.5
-0.2
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.2
+0.3
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
+0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.5
-0.2
+0.0
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
+0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.1
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.5
+0.0
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.5
+0.2
N.D.
N.D.
remove
mRNA_1857
plot
remove
mRNA_1858
plot
remove
mRNA_1859
remove
mRNA_1860
plot
remove
mRNA_1861
plot