Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10230 and 10231 are separated by 133 nucleotides10231 and 10232 are separated by 382 nucleotides10232 and 10233 are separated by 214 nucleotides10233 and 10234 are separated by 162 nucleotides mRNA_1862: 10230 - Interpro DNA replication factor Cdt1 C-terminal domain 0, at 394,402 to 396,759 10230 mRNA_1863: 10231 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 396,893 to 397,973 10231 mRNA_1864: 10232 - SUPERFAMILY--SSF53300, at 398,356 to 399,523 10232 mRNA_1865: 10233 - K02729 PSMA5 20S proteasome subunit alpha 5, at 399,738 to 401,124 10233 mRNA_1866: 10234 - KOG4455 Uncharacterized conserved protein, at 401,287 to 402,071 10234
Group Condition mRNA_1862 mRNA_1863 mRNA_1864 mRNA_1865 mRNA_1866
10230 10231 10232 10233 10234
growth on ricinoleic acid YNB Glucose +0.0 -0.0 -1.5 N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.6 -1.4 N.D. -0.2
growth on ypd YPD -0.0 -0.2 -1.9 N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.1 -1.4 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.8 +0.1 N.D. -0.7
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.9 N.D. +0.3
growth on oleic acid YNB Glucose -0.4 -0.1 -0.6 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.6 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.7 N.D. +0.8
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 -0.2 N.D. +0.0
auxotrophy YNB Glucose -0.1 -0.3 -0.4 N.D. +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -1.0 +1.3 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.2 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 +0.3 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.1 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.3 +0.9 N.D. -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 -0.1 N.D. +0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 +0.7 N.D. +0.6
auxotrophy Dropout Complete -0.1 +0.2 +0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 +1.7 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.6 +1.8 N.D. -0.3
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