Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10231 and 10232 are separated by 382 nucleotides10232 and 10233 are separated by 214 nucleotides10233 and 10234 are separated by 162 nucleotides10234 and 10235 are separated by 445 nucleotides mRNA_1863: 10231 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 396,893 to 397,973 10231 mRNA_1864: 10232 - SUPERFAMILY--SSF53300, at 398,356 to 399,523 10232 mRNA_1865: 10233 - K02729 PSMA5 20S proteasome subunit alpha 5, at 399,738 to 401,124 10233 mRNA_1866: 10234 - KOG4455 Uncharacterized conserved protein, at 401,287 to 402,071 10234 mRNA_1867: 10235 - HMMPfam-von Willebrand factor type A domain-PF00092,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 402,517 to 403,659 10235
Group Condition mRNA_1863 mRNA_1864 mRNA_1865 mRNA_1866 mRNA_1867
10231 10232 10233 10234 10235
growth on ricinoleic acid YNB Glucose -0.0 -1.5 N.D. -0.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -1.4 N.D. -0.4 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -1.4 N.D. -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.9 N.D. +0.3 -0.9
growth on ypd YPD -0.2 -1.9 N.D. +0.4 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 +0.1 N.D. -0.7 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.6 N.D. +0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.9 N.D. -0.7 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 N.D. +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 N.D. +0.1 -0.8
auxotrophy YNB Glucose -0.3 -0.4 N.D. +0.5 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 +1.3 N.D. -0.3 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.7 N.D. +0.8 +0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.2 N.D. +0.6 -0.2
growth on oleic acid YNB Glucose -0.1 -0.6 N.D. +0.4 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.7 N.D. +0.6 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 N.D. +0.8 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 N.D. +0.5 +0.0
auxotrophy Dropout Complete +0.2 +0.2 N.D. +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +1.7 N.D. -0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +1.8 N.D. -0.3 +0.5
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