Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10239 and 10240 are separated by 242 nucleotides10240 and 10241 are separated by 213 nucleotides10241 and 10242 are separated by 151 nucleotides10242 and 10243 are separated by 276 nucleotides mRNA_1871: 10239 - K14855 RSA4, NLE1 ribosome assembly protein 4, at 407,656 to 409,995 10239 mRNA_1872: 10240 - K14566 UTP24, FCF1 U3 small nucleolar RNA-associated protein 24, at 410,238 to 411,340 10240 mRNA_1873: 10241 - BLAST Rab geranylgeranyltransferase [Mycena chlorophos], at 411,554 to 414,002 10241 mRNA_1874: 10242 - BLAST midasin [Pseudozyma hubeiensis SY62], at 414,154 to 415,207 10242 mRNA_1875: 10243 - Hypothetical Protein, at 415,484 to 416,261 10243
Group Condition mRNA_1871 mRNA_1872 mRNA_1873 mRNA_1874 mRNA_1875
10239 10240 10241 10242 10243
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -1.0 -0.4 N.D.
growth on ypd YPD N.D. N.D. -0.1 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.2 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.3 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1 -0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.3 -0.5 N.D.
auxotrophy YNB Glucose N.D. N.D. +0.5 -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.1 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.4 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 -0.3 N.D.
auxotrophy Dropout Complete N.D. N.D. +0.4 -0.4 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.4 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.3 +0.5 N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.3 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.5 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.2 +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +1.0 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.3 +0.1 N.D.
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