Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10247 and 10248 are separated by 141 nucleotides10248 and 10249 are separated by 583 nucleotides10249 and 10250 are separated by 679 nucleotides10250 and 10251 are separated by 323 nucleotides mRNA_1879: 10247 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 423,115 to 424,156 10247 mRNA_1880: 10248 - KOG0254 Predicted transporter (major facilitator superfamily), at 424,298 to 426,105 10248 mRNA_1881: 10249 - K11770 SFH1 chromatin structure-remodeling complex subunit SFH1, at 426,689 to 428,081 10249 mRNA_1882: 10250 - HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174, at 428,761 to 429,844 10250 mRNA_1883: 10251 - KOG2665 Predicted FAD-dependent oxidoreductase, at 430,168 to 431,962 10251
Group Condition mRNA_1879 mRNA_1880 mRNA_1881 mRNA_1882 mRNA_1883
10247 10248 10249 10250 10251
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.9 N.D. N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.8 N.D. N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.7 N.D. N.D. +0.0
auxotrophy Dropout Complete -0.1 -0.0 N.D. N.D. -0.4
growth on oleic acid YNB Oleic Acid -0.2 -0.3 N.D. N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.3 -0.4 N.D. N.D. -0.0
growth on ypd YPD -0.0 +0.2 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 N.D. N.D. -0.1
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 N.D. N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.4 N.D. N.D. +0.0
auxotrophy YNB Glucose -0.1 +0.3 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.0 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.4 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.6 N.D. N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 N.D. N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.3 N.D. N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.2 N.D. N.D. +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.3 N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.5 N.D. N.D. +0.2
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