Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10250 and 10251 are separated by 323 nucleotides10251 and 10252 are separated by 615 nucleotides10252 and 10253 are separated by 261 nucleotides10253 and 10254 are separated by 447 nucleotides mRNA_1882: 10250 - HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174, at 428,761 to 429,844 10250 mRNA_1883: 10251 - KOG2665 Predicted FAD-dependent oxidoreductase, at 430,168 to 431,962 10251 mRNA_1884: 10252 - Hypothetical Protein, at 432,578 to 433,282 10252 mRNA_1885: 10253 - KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family), at 433,544 to 436,141 10253 mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436,589 to 438,730 10254
Group Condition mRNA_1882 mRNA_1883 mRNA_1884 mRNA_1885 mRNA_1886
10250 10251 10252 10253 10254
growth on ypd YPD N.D. -0.1 -0.7 -0.4 +0.2
auxotrophy Dropout Complete N.D. -0.4 -0.4 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 +0.2 -0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.3 +0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.6 +0.2 +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.1 -0.2 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.2 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.0 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.3 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.0 +0.1 -0.1
growth on oleic acid YNB Glucose N.D. +0.0 -0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.4 -0.1 -0.4
auxotrophy YNB Glucose N.D. +0.1 -0.0 -0.3 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.0 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.3 -0.2 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 -0.0 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.3 +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 -0.0 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.6 +0.1 -0.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 -0.0 +0.2 +0.3
remove
mRNA_1882
plot
remove
mRNA_1883
plot
remove
mRNA_1884
remove
mRNA_1885
plot
remove
mRNA_1886
plot