Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10252 and 10253 are separated by 261 nucleotides10253 and 10254 are separated by 447 nucleotides10254 and 10255 are separated by 549 nucleotides10255 and 10256 are separated by 742 nucleotides mRNA_1884: 10252 - Hypothetical Protein, at 432,578 to 433,282 10252 mRNA_1885: 10253 - KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family), at 433,544 to 436,141 10253 mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436,589 to 438,730 10254 mRNA_1887: 10255 - K14823 EBP2, EBNA1BP2 rRNA-processing protein EBP2, at 439,280 to 440,428 10255 mRNA_1888: 10256 - HMMPfam-Protein of unknown function (DUF2423)-PF10338, at 441,171 to 441,971 10256
Group Condition mRNA_1884 mRNA_1885 mRNA_1886 mRNA_1887 mRNA_1888
10252 10253 10254 10255 10256
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.2 N.D. -1.9
growth on ypd YPD -0.7 -0.4 +0.2 N.D. -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 -0.1 N.D. -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.5 -0.4 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.1 -0.4 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 -0.0 N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 +0.2 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.2 N.D. +0.2
auxotrophy Dropout Complete -0.4 -0.1 +0.0 N.D. +1.0
growth on oleic acid YNB Oleic Acid +0.1 -0.2 -0.1 N.D. +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.5 -0.2 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 +0.3 N.D. +0.7
growth on oleic acid YNB Glucose -0.0 -0.1 +0.1 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 -0.1 N.D. +0.6
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 +0.2 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.1 -0.1 N.D. +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 -0.2 N.D. +1.4
auxotrophy YNB Glucose -0.0 -0.3 +0.5 N.D. +0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.2 +0.0 N.D. +1.7
growth on ricinoleic acid YNB Glucose -0.2 -0.0 +0.1 N.D. +1.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.2 +0.3 N.D. +1.2
remove
mRNA_1884
plot
remove
mRNA_1885
plot
remove
mRNA_1886
remove
mRNA_1887
plot
remove
mRNA_1888
plot