Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10254 and 10255 are separated by 549 nucleotides10255 and 10256 are separated by 742 nucleotides10256 and 10257 are separated by 89 nucleotides10257 and 10258 are separated by 69 nucleotides mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436,589 to 438,730 10254 mRNA_1887: 10255 - K14823 EBP2, EBNA1BP2 rRNA-processing protein EBP2, at 439,280 to 440,428 10255 mRNA_1888: 10256 - HMMPfam-Protein of unknown function (DUF2423)-PF10338, at 441,171 to 441,971 10256 mRNA_1889: 10257 - Hypothetical Protein, at 442,061 to 442,321 10257 mRNA_1890: 10258 - Hypothetical Protein, at 442,391 to 442,819 10258
Group Condition mRNA_1886 mRNA_1887 mRNA_1888 mRNA_1889 mRNA_1890
10254 10255 10256 10257 10258
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -1.9 -0.4 -0.3
growth on ypd YPD +0.2 N.D. -0.8 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.9 +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.2 -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. +0.3 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. +0.2 -0.0 +0.8
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. +0.4 -0.1 +0.3
auxotrophy Dropout Complete +0.0 N.D. +1.0 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. +1.2 -0.0 -0.8
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.0 -0.1 +0.5
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.7 +0.1 +0.2
growth on oleic acid YNB Glucose +0.1 N.D. +0.8 +0.1 +0.1
auxotrophy YNB Glucose +0.5 N.D. +0.8 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +1.4 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.6 +0.2 +0.7
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.7 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.9 -0.0 +0.7
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.7 +0.1 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. +1.7 +0.3 -0.3
growth on ricinoleic acid YNB Glucose +0.1 N.D. +1.4 +0.1 +0.1
remove
mRNA_1886
plot
remove
mRNA_1887
plot
remove
mRNA_1888
remove
mRNA_1889
plot
remove
mRNA_1890
plot