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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10257 and 10258 are separated by 69 nucleotides
10258 and 10259 are separated by 594 nucleotides
10259 and 10260 are separated by 596 nucleotides
10260 and 10261 are separated by 653 nucleotides
mRNA_1889: 10257 - Hypothetical Protein, at 442,061 to 442,321
10257
mRNA_1890: 10258 - Hypothetical Protein, at 442,391 to 442,819
10258
mRNA_1891: 10259 - K03083 GSK3B glycogen synthase kinase 3 beta, at 443,414 to 444,929
10259
mRNA_1892: 10260 - K15743 CES3_5 carboxylesterase 3/5, at 445,526 to 447,987
10260
mRNA_1893: 10261 - HMMPfam-Amidohydrolase-PF04909,SUPERFAMILY--SSF51556, at 448,641 to 450,220
10261
Group
Condition
mRNA
_1889
mRNA
_1890
mRNA
_1891
mRNA
_1892
mRNA
_1893
10257
10258
10259
10260
10261
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.3
-3.3
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.3
-3.1
+0.3
+0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
-2.6
-0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.3
-2.2
-0.3
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
-0.5
+0.3
-0.2
auxotrophy
YNB Glucose
-0.0
-0.2
+0.1
-0.0
-0.2
auxotrophy
Dropout Complete
-0.2
-0.2
+0.4
-0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.8
+0.5
+0.2
-0.1
growth on oleic acid
YNB Glucose
+0.1
+0.1
-0.3
-0.3
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.5
-0.4
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
-0.3
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.7
-1.0
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.5
+0.4
-0.7
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
+0.1
+0.0
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.1
-0.1
+0.1
growth on ypd
YPD
-0.2
-0.1
+0.6
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.3
+0.8
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.5
+0.7
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.7
+1.1
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.4
+0.7
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.8
+2.2
-0.1
+0.0
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