Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10260 and 10261 are separated by 653 nucleotides10261 and 10262 are separated by 361 nucleotides10262 and 10263 are separated by 115 nucleotides10263 and 10264 are separated by 498 nucleotides mRNA_1892: 10260 - K15743 CES3_5 carboxylesterase 3/5, at 445,526 to 447,987 10260 mRNA_1893: 10261 - HMMPfam-Amidohydrolase-PF04909,SUPERFAMILY--SSF51556, at 448,641 to 450,220 10261 mRNA_1894: 10262 - K01253 EPHX1 microsomal epoxide hydrolase, at 450,582 to 452,258 10262 mRNA_1895: 10263 - K09247 CYP1, HAP1 heme activator protein 1, at 452,374 to 455,740 10263 mRNA_1896: 10264 - K00844 HK hexokinase, at 456,239 to 458,071 10264
Group Condition mRNA_1892 mRNA_1893 mRNA_1894 mRNA_1895 mRNA_1896
10260 10261 10262 10263 10264
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.5 +0.1 -3.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 -0.4 -0.6 -1.6
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +0.1 -0.4 -2.0
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.2 -0.3 -0.5 -0.6
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.2 -0.3 +0.1 -2.1
auxotrophy YNB Glucose -0.0 -0.2 -0.2 -0.6 -1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.1 +0.1 -1.6
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.0 -0.2 -0.6 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.4 +0.0 -0.6 -1.0
growth on oleic acid YNB Glucose -0.3 +0.3 +0.0 -0.7 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 +0.1 -0.6 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.1 -0.3 -0.1
auxotrophy Dropout Complete -0.3 -0.1 -0.1 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.0 +0.0 -0.5 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 -0.2 +0.3 +0.1
growth on ypd YPD +0.1 +0.1 +0.2 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.2 -0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.3 +0.1 -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.0 +0.4 -0.3 +0.3
growth on oleic acid YNB Oleic Acid -0.3 +0.2 +0.4 -0.1 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.4 +0.6 +0.1 +0.9
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