Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10265 and 10266 are separated by 594 nucleotides
10266 and 10267 are separated by 527 nucleotides
10267 and 10268 are separated by 278 nucleotides
10268 and 10269 are separated by 324 nucleotides
mRNA_1897: 10265 - K07443 ybaZ methylated-DNA-protein-cysteine methyltransferase related protein, at 458,444 to 459,156
10265
mRNA_1898: 10266 - K09422 MYBP myb proto-oncogene protein, plant, at 459,751 to 462,341
10266
mRNA_1899: 10267 - K14946 RBFOX, FOX RNA binding protein fox-1, at 462,869 to 464,416
10267
mRNA_1900: 10268 - K15071 RCY1, POF6 recyclin-1, at 464,695 to 468,117
10268
mRNA_1901: 10269 - HMMPfam-Spo7-like protein-PF03907, at 468,442 to 470,059
10269
Group
Condition
mRNA
_1897
mRNA
_1898
mRNA
_1899
mRNA
_1900
mRNA
_1901
10265
10266
10267
10268
10269
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
+0.5
-1.4
-1.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
-0.7
-0.9
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
N.D.
-0.4
-0.5
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
N.D.
+0.1
+0.2
-1.9
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
N.D.
-0.2
-0.9
-0.6
auxotrophy
Dropout Complete
-0.1
N.D.
-0.0
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.6
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
-0.2
-0.5
-0.1
growth on ypd
YPD
+0.0
N.D.
-0.6
+0.0
+0.3
auxotrophy
YNB Glucose
+0.1
N.D.
+0.0
+0.4
-0.4
growth on oleic acid
YNB Oleic Acid
-0.0
N.D.
+0.3
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
N.D.
+0.3
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
+0.0
-0.3
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
+0.2
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
N.D.
+0.3
-0.3
+0.3
growth on ricinoleic acid
YNB Glucose
-0.0
N.D.
+0.3
+0.6
-0.6
growth on oleic acid
YNB Glucose
-0.1
N.D.
+0.1
-0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.0
+0.0
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
+0.7
+1.0
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
+0.3
+0.9
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
+0.4
+0.3
+0.9
remove
mRNA_1897
plot
remove
mRNA_1898
plot
remove
mRNA_1899
remove
mRNA_1900
plot
remove
mRNA_1901
plot