Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10272 and 10273 are separated by 205 nucleotides10273 and 10274 are separated by 1346 nucleotides10274 and 10275 are separated by 3747 nucleotides10275 and 10276 are separated by 1345 nucleotides mRNA_1904: 10272 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 479,057 to 480,594 10272 mRNA_1905: 10273 - Hypothetical Protein, at 480,800 to 481,665 10273 mRNA_1906: 10274 - KOG0627 Heat shock transcription factor, at 483,012 to 484,134 10274 mRNA_1907: 10275 - Hypothetical Protein, at 487,882 to 489,189 10275 mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490,535 to 492,598 10276
Group Condition mRNA_1904 mRNA_1905 mRNA_1906 mRNA_1907 mRNA_1908
10272 10273 10274 10275 10276
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 -2.7 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.3 -2.0 N.D. -0.6
growth on oleic acid YNB Glucose +0.1 -0.2 -2.0 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 -2.0 N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.0 -2.6 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -2.4 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 -1.7 N.D. -0.3
auxotrophy Dropout Complete -0.1 -0.1 -1.6 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.4 -0.1 -1.4 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 -1.7 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -1.3 N.D. +0.1
auxotrophy YNB Glucose -0.1 -0.0 -1.3 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.0 -1.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 -0.1 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 +0.2 N.D. -0.5
growth on ypd YPD -0.4 +0.1 -0.5 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 -0.6 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 -0.3 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.0 -0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.1 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.2 +0.5 N.D. +0.5
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