Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10276 and 10277 are separated by 581 nucleotides10277 and 10278 are separated by 180 nucleotides10278 and 10279 are separated by 167 nucleotides10279 and 10280 are separated by 331 nucleotides mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490,535 to 492,598 10276 mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493,180 to 495,383 10277 mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495,564 to 497,825 10278 mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497,993 to 499,871 10279 mRNA_1912: 10280 - K04450 ATF2, CREBP1 cyclic AMP-dependent transcription factor ATF-2, at 500,203 to 502,614 10280
Group Condition mRNA_1908 mRNA_1909 mRNA_1910 mRNA_1911 mRNA_1912
10276 10277 10278 10279 10280
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.1 +0.1 -2.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 -0.4 -1.9 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.0 -0.0 -1.0 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 -0.1 -0.9 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.5 -0.3 -1.1 +0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.5 -0.2 -0.0 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.4 +0.1 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 -0.1 +0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 +0.0 -0.4 +0.1
growth on oleic acid YNB Glucose -0.7 +0.2 -0.1 +0.0 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.0 -0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.6 +0.1 -0.1 -0.8
growth on oleic acid YNB Oleic Acid -0.6 -0.1 -0.1 +0.7 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 -0.2 +0.3 +0.0
growth on ypd YPD +0.1 +0.6 +0.3 -0.3 +0.2
auxotrophy YNB Glucose -0.1 -0.3 +0.1 +0.2 +1.1
auxotrophy Dropout Complete -0.2 -0.1 +0.0 +0.4 +0.9
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 -0.0 +0.4 +1.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 +0.0 +0.5 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.4 +1.2 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 -0.1 +1.3 +0.3
remove
mRNA_1908
plot
remove
mRNA_1909
plot
remove
mRNA_1910
remove
mRNA_1911
plot
remove
mRNA_1912
plot