Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10277 and 10278 are separated by 180 nucleotides10278 and 10279 are separated by 167 nucleotides10279 and 10280 are separated by 331 nucleotides10280 and 10281 are separated by 578 nucleotides mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493,180 to 495,383 10277 mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495,564 to 497,825 10278 mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497,993 to 499,871 10279 mRNA_1912: 10280 - K04450 ATF2, CREBP1 cyclic AMP-dependent transcription factor ATF-2, at 500,203 to 502,614 10280 mRNA_1913: 10281 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 503,193 to 504,426 10281
Group Condition mRNA_1909 mRNA_1910 mRNA_1911 mRNA_1912 mRNA_1913
10277 10278 10279 10280 10281
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 -2.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.4 -1.9 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 -0.9 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 -1.0 +0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.3 -1.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 -0.3 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.5 -0.2 -0.0 +0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 -0.4 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.1 -0.1 -0.8 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 +0.3 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 +0.4 +0.2 N.D.
growth on ypd YPD +0.6 +0.3 -0.3 +0.2 N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 +0.0 +0.7 N.D.
auxotrophy YNB Glucose -0.3 +0.1 +0.2 +1.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.7 +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 +0.5 +0.8 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 +1.3 +0.3 N.D.
auxotrophy Dropout Complete -0.1 +0.0 +0.4 +0.9 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 +0.4 +1.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 +1.2 +1.0 N.D.
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