Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10284 and 10285 are separated by 301 nucleotides10285 and 10286 are separated by 1384 nucleotides10286 and 10287 are separated by 472 nucleotides10287 and 10288 are separated by 305 nucleotides mRNA_1916: 10284 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Domain of unknown function (DUF3425)-PF11905,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 508,004 to 509,890 10284 mRNA_1917: 10285 - K04488 iscU, nifU nitrogen fixation protein NifU and related proteins, at 510,192 to 511,246 10285 mRNA_1918: 10286 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 512,631 to 512,981 10286 mRNA_1919: 10287 - K11340 ACTL6A, INO80K actin-like protein 6A, at 513,454 to 515,296 10287 mRNA_1920: 10288 - Hypothetical Protein, at 515,602 to 517,203 10288
Group Condition mRNA_1916 mRNA_1917 mRNA_1918 mRNA_1919 mRNA_1920
10284 10285 10286 10287 10288
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 N.D. N.D. N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 N.D. N.D. N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 N.D. N.D. N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. N.D. N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. N.D. N.D. -0.2
growth on ypd YPD +0.3 N.D. N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. N.D. N.D. +0.1
auxotrophy YNB Glucose +0.3 N.D. N.D. N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.0 N.D. N.D. N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.8 N.D. N.D. N.D. -0.7
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. N.D. N.D. +0.2
auxotrophy Dropout Complete +0.5 N.D. N.D. N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 N.D. N.D. N.D. +0.1
growth on oleic acid YNB Glucose +0.3 N.D. N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. N.D. +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. N.D. N.D. +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 N.D. N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 N.D. N.D. N.D. +0.9
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