Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10287 and 10288 are separated by 305 nucleotides10288 and 10289 are separated by 638 nucleotides10289 and 10290 are separated by 36 nucleotides10290 and 10291 are separated by 219 nucleotides mRNA_1919: 10287 - K11340 ACTL6A, INO80K actin-like protein 6A, at 513,454 to 515,296 10287 mRNA_1920: 10288 - Hypothetical Protein, at 515,602 to 517,203 10288 mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517,842 to 518,810 10289 mRNA_1922: 10290 - Hypothetical Protein, at 518,847 to 519,239 10290 mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519,459 to 521,071 10291
Group Condition mRNA_1919 mRNA_1920 mRNA_1921 mRNA_1922 mRNA_1923
10287 10288 10289 10290 10291
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -2.8 -2.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -1.1 -0.4 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -1.2 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.5 -1.6 -0.1
auxotrophy Dropout Complete N.D. -0.3 -1.2 +0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.7 -0.3 -0.0 +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.0 -0.2 -0.7 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.7 -2.2 +0.8 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 -0.1 +0.3 -0.5
auxotrophy YNB Glucose N.D. -0.3 -0.4 +0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.1 -0.7 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.0 -0.6 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 -0.6 +0.2 +0.5
growth on oleic acid YNB Glucose N.D. +0.4 -0.2 -0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.1 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.7 -0.2 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 +0.0 +0.3 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 -0.2 +0.4 +0.0
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.2 +0.6 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.9 -0.1 +0.6 -0.1
growth on ypd YPD N.D. -0.4 +1.5 +1.2 -0.2
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