Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10288 and 10289 are separated by 638 nucleotides10289 and 10290 are separated by 36 nucleotides10290 and 10291 are separated by 219 nucleotides10291 and 10292 are separated by 222 nucleotides mRNA_1920: 10288 - Hypothetical Protein, at 515,602 to 517,203 10288 mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517,842 to 518,810 10289 mRNA_1922: 10290 - Hypothetical Protein, at 518,847 to 519,239 10290 mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519,459 to 521,071 10291 mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521,294 to 523,495 10292
Group Condition mRNA_1920 mRNA_1921 mRNA_1922 mRNA_1923 mRNA_1924
10288 10289 10290 10291 10292
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -2.8 -2.2 +0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.2 -0.3 -0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -1.1 -0.4 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.5 -1.6 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 +0.3 -0.5 -0.1
auxotrophy Dropout Complete -0.3 -1.2 +0.4 +0.0 +0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.2 -0.7 +0.1 +0.0
auxotrophy YNB Glucose -0.3 -0.4 +0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -2.2 +0.8 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.3 -0.0 +0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.6 +0.2 +0.5 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.7 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.6 -0.0 +0.1
growth on oleic acid YNB Glucose +0.4 -0.2 -0.3 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.2 +0.1 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 +0.1 +0.6 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.0 +0.3 +0.8 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.2 +0.4 +0.0 +0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.6 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 -0.1 +0.6 -0.1 +0.2
growth on ypd YPD -0.4 +1.5 +1.2 -0.2 -0.0
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