Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10292 and 10293 are separated by 166 nucleotides10293 and 10294 are separated by 221 nucleotides10294 and 10295 are separated by 572 nucleotides10295 and 10296 are separated by 1087 nucleotides mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521,294 to 523,495 10292 mRNA_1925: 10293 - K13239 PECI peroxisomal 3,2-trans-enoyl-CoA isomerase, at 523,662 to 525,143 10293 mRNA_1926: 10294 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 525,365 to 527,827 10294 mRNA_1927: 10295 - K19691 NIK1, TCSC osomolarity two-component system, sensor histidine kinase NIK1, at 528,400 to 533,209 10295 mRNA_1928: 10296 - Hypothetical Protein, at 534,297 to 534,878 10296
Group Condition mRNA_1924 mRNA_1925 mRNA_1926 mRNA_1927 mRNA_1928
10292 10293 10294 10295 10296
growth on oleic acid YNB Glucose +0.0 -0.4 -0.1 -0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.0 +0.1 -0.7 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 +0.1 -0.2 -0.4
growth on oleic acid YNB Oleic Acid +0.0 -0.3 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 +0.1 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 +0.4 -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.4 -0.1 -0.1
growth on ypd YPD -0.0 -0.7 +0.0 -0.1 +0.2
auxotrophy YNB Glucose -0.1 +0.0 +0.5 -0.4 -0.5
auxotrophy Dropout Complete +0.2 -0.1 +0.2 -0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4 -0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.0 -0.2 -0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 +0.2 -0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 +0.1 -0.7 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.6 +0.5 -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.1 +0.3 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 +0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 +0.4 -0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 +0.7 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.2 +0.6 +0.5 +0.3
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