Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10292 and 10293 are separated by 166 nucleotides
10293 and 10294 are separated by 221 nucleotides
10294 and 10295 are separated by 572 nucleotides
10295 and 10296 are separated by 1087 nucleotides
mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521,294 to 523,495
10292
mRNA_1925: 10293 - K13239 PECI peroxisomal 3,2-trans-enoyl-CoA isomerase, at 523,662 to 525,143
10293
mRNA_1926: 10294 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 525,365 to 527,827
10294
mRNA_1927: 10295 - K19691 NIK1, TCSC osomolarity two-component system, sensor histidine kinase NIK1, at 528,400 to 533,209
10295
mRNA_1928: 10296 - Hypothetical Protein, at 534,297 to 534,878
10296
Group
Condition
mRNA
_1924
mRNA
_1925
mRNA
_1926
mRNA
_1927
mRNA
_1928
10292
10293
10294
10295
10296
growth on oleic acid
YNB Glucose
+0.0
-0.4
-0.1
-0.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.0
+0.1
-0.7
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
+0.1
-0.2
-0.4
growth on oleic acid
YNB Oleic Acid
+0.0
-0.3
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.1
+0.1
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
+0.4
-0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.4
-0.1
-0.1
growth on ypd
YPD
-0.0
-0.7
+0.0
-0.1
+0.2
auxotrophy
YNB Glucose
-0.1
+0.0
+0.5
-0.4
-0.5
auxotrophy
Dropout Complete
+0.2
-0.1
+0.2
-0.3
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.1
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.0
-0.2
-0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.1
+0.2
-0.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.0
+0.1
-0.7
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.6
+0.5
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
-0.1
+0.3
-0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.3
+0.3
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.1
+0.2
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
+0.4
-0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.0
+0.7
-0.2
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.2
+0.6
+0.5
+0.3
remove
mRNA_1924
plot
remove
mRNA_1925
plot
remove
mRNA_1926
remove
mRNA_1927
plot
remove
mRNA_1928
plot