Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10296 and 10297 are separated by 1100 nucleotides
10297 and 10298 are separated by 346 nucleotides
10298 and 10299 are separated by 1044 nucleotides
10299 and 10300 are separated by 287 nucleotides
mRNA_1928: 10296 - Hypothetical Protein, at 534,297 to 534,878
10296
mRNA_1929: 10297 - K07880 RAB4B Ras-related protein Rab-4B, at 535,979 to 537,358
10297
mRNA_1930: 10298 - KOG1634 Predicted transcription factor DATF1, contains PHD and TFS2M domains, at 537,705 to 541,731
10298
mRNA_1931: 10299 - KOG2112 Lysophospholipase, at 542,776 to 544,439
10299
mRNA_1932: 10300 - BLAST family 69 glycosyltransferase [Melampsora larici-..., at 544,727 to 545,015
10300
Group
Condition
mRNA
_1928
mRNA
_1929
mRNA
_1930
mRNA
_1931
mRNA
_1932
10296
10297
10298
10299
10300
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-1.0
N.D.
-0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.4
N.D.
-0.8
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.3
N.D.
-0.5
-0.7
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
N.D.
-0.5
-0.6
growth on oleic acid
YNB Oleic Acid
-0.1
+0.3
N.D.
-0.1
-0.5
growth on oleic acid
YNB Glucose
-0.3
+0.3
N.D.
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.4
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.3
N.D.
-0.1
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.3
N.D.
+0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.6
N.D.
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.4
N.D.
-0.3
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.2
N.D.
-0.6
+0.6
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
N.D.
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
N.D.
+0.0
+0.4
auxotrophy
Dropout Complete
-0.4
+0.7
N.D.
-0.5
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.3
N.D.
+0.0
-0.0
auxotrophy
YNB Glucose
-0.5
+0.7
N.D.
+0.0
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.6
N.D.
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.9
N.D.
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.3
N.D.
-0.1
+0.7
growth on ypd
YPD
+0.2
-0.2
N.D.
-0.0
+3.7
remove
mRNA_1928
plot
remove
mRNA_1929
plot
remove
mRNA_1930
remove
mRNA_1931
plot
remove
mRNA_1932
plot