Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10305 and 10306 are separated by 551 nucleotides10306 and 10307 are separated by 317 nucleotides10307 and 10308 are separated by 560 nucleotides10308 and 10309 are separated by 429 nucleotides mRNA_1937: 10305 - K18342 OTUD6 OTU domain-containing protein 6, at 554,394 to 556,031 10305 mRNA_1938: 10306 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 556,583 to 558,262 10306 mRNA_1939: 10307 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 558,580 to 560,603 10307 mRNA_1940: 10308 - K00276 AOC3, AOC2, tynA primary-amine oxidase, at 561,164 to 563,777 10308 mRNA_1941: 10309 - KOG3798 Predicted Zn-dependent hydrolase (beta-lactamase superfamily), at 564,207 to 567,007 10309
Group Condition mRNA_1937 mRNA_1938 mRNA_1939 mRNA_1940 mRNA_1941
10305 10306 10307 10308 10309
facs on lipid accumulation Sorted No BODIPY Gate -2.2 -0.4 +0.4 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -2.5 -0.3 +0.3 -0.1 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -2.0 -0.1 +0.4 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.2 -0.1 -0.3 -0.5 +0.5
growth on oleic acid YNB Oleic Acid -1.0 -0.2 -0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 -0.0 -0.2 -0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 +0.6 +0.1 +0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -1.8 +0.6 -0.1 +0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.9 +0.3 -0.2 +0.1 -0.5
growth on oleic acid YNB Glucose -0.7 +0.2 -0.1 -0.0 -0.3
growth on ypd YPD -0.3 -0.1 -0.3 -0.2 -0.1
auxotrophy Dropout Complete -0.8 -0.2 +0.0 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.0 -0.2 -0.1 -0.7
auxotrophy YNB Glucose -0.9 +0.2 +0.1 +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 -0.1 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.4 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 -0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 -0.1 -0.1 +0.4
growth on ricinoleic acid YNB Glucose -0.9 +0.7 -0.1 +0.3 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.3 -0.2 +0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 +0.1 -0.2 +0.4
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