Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10307 and 10308 are separated by 560 nucleotides10308 and 10309 are separated by 429 nucleotides10309 and 10310 are separated by 432 nucleotides10310 and 10311 are separated by 240 nucleotides mRNA_1939: 10307 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 558,580 to 560,603 10307 mRNA_1940: 10308 - K00276 AOC3, AOC2, tynA primary-amine oxidase, at 561,164 to 563,777 10308 mRNA_1941: 10309 - KOG3798 Predicted Zn-dependent hydrolase (beta-lactamase superfamily), at 564,207 to 567,007 10309 mRNA_1942: 10310 - HMMPfam-PLD-like domain-PF13091,ProSiteProfiles-Phospholipase D phosphodiesterase active site profile.-PS50035,SMART-Phospholipase D. Active site motifs.-SM00155,SUPERFAMILY--SSF56024, at 567,440 to 570,897 10310 mRNA_1943: 10311 - Hypothetical Protein, at 571,138 to 572,203 10311
Group Condition mRNA_1939 mRNA_1940 mRNA_1941 mRNA_1942 mRNA_1943
10307 10308 10309 10310 10311
growth on ypd YPD -0.3 -0.2 -0.1 -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 -0.5 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 -0.3 -0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.5 +0.5 -0.6 -0.0
growth on oleic acid YNB Oleic Acid -0.0 -0.0 -0.2 -0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 -0.4 -0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.2 -0.3 -0.3
growth on oleic acid YNB Glucose -0.1 -0.0 -0.3 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 -0.1 -0.8 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.5 -0.2 -1.0 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 +0.2 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.1 -0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.7 +0.7 +0.1
auxotrophy Dropout Complete +0.0 +0.1 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.3 +0.4 -0.3 -0.4
auxotrophy YNB Glucose +0.1 +0.0 +0.1 +0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.0 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 +0.3 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 +0.5 -0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 +0.4 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.4 -0.0 +0.2
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