Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10309 and 10310 are separated by 432 nucleotides10310 and 10311 are separated by 240 nucleotides10311 and 10312 are separated by 390 nucleotides10312 and 10313 are separated by 583 nucleotides mRNA_1941: 10309 - KOG3798 Predicted Zn-dependent hydrolase (beta-lactamase superfamily), at 564,207 to 567,007 10309 mRNA_1942: 10310 - HMMPfam-PLD-like domain-PF13091,ProSiteProfiles-Phospholipase D phosphodiesterase active site profile.-PS50035,SMART-Phospholipase D. Active site motifs.-SM00155,SUPERFAMILY--SSF56024, at 567,440 to 570,897 10310 mRNA_1943: 10311 - Hypothetical Protein, at 571,138 to 572,203 10311 mRNA_1944: 10312 - BLAST Respiratory supercomplex factor 2, mitochondrial [Cla..., at 572,594 to 573,767 10312 mRNA_1945: 10313 - Hypothetical Protein, at 574,351 to 575,148 10313
Group Condition mRNA_1941 mRNA_1942 mRNA_1943 mRNA_1944 mRNA_1945
10309 10310 10311 10312 10313
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.8 -0.0 +0.6 -3.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.0 +0.6 -1.2 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 -0.0 +0.3 -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.6 -0.0 -0.3 -1.2
growth on ypd YPD -0.1 -0.5 -0.2 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 -0.1 -0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 -0.3 +0.0 +0.4
auxotrophy YNB Glucose +0.1 +0.1 -0.5 -0.3 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.6 -0.2 -0.5 +1.4
growth on oleic acid YNB Oleic Acid -0.2 -0.5 -0.2 +0.1 +0.6
auxotrophy Dropout Complete -0.1 -0.1 -0.1 -0.2 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.2 +0.3 +0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.3 +0.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.0 +0.2 +0.1 -0.3
growth on ricinoleic acid YNB Glucose +0.4 -0.3 -0.4 -0.2 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.6 -0.2 -0.2 +1.7
growth on oleic acid YNB Glucose -0.3 +0.1 -0.1 +0.3 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.2 +0.1 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.4 -0.0 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.7 +0.1 -0.2 +1.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.0 +0.1 +0.2 +1.6
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