Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10315 and 10316 are separated by 1724 nucleotides10316 and 10317 are separated by 491 nucleotides10317 and 10318 are separated by 1235 nucleotides10318 and 10319 are separated by 506 nucleotides mRNA_1947: 10315 - K14864 FTSJ1, TRM7 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase, at 577,345 to 578,684 10315 mRNA_1948: 10316 - K08176 PHO84 MFS transporter, PHS family, inorganic phosphate transporter, at 580,409 to 582,858 10316 mRNA_1949: 10317 - KOG0254 Predicted transporter (major facilitator superfamily), at 583,350 to 585,589 10317 mRNA_1950: 10318 - K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9, at 586,825 to 587,644 10318 mRNA_1951: 10319 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 588,151 to 591,426 10319
Group Condition mRNA_1947 mRNA_1948 mRNA_1949 mRNA_1950 mRNA_1951
10315 10316 10317 10318 10319
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 -0.6 N.D. -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 -0.0 N.D. -0.8
growth on ypd YPD -0.8 +0.1 -0.1 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.2 -0.4 N.D. -0.5
growth on ricinoleic acid YNB Glucose +0.0 -0.1 -0.3 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.0 +0.2 N.D. -0.7
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.1 -0.1 N.D. -0.1
growth on oleic acid YNB Glucose -0.3 -0.0 +0.1 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 +0.2 +0.2 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.1 N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 -0.0 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 -0.4 N.D. +0.1
auxotrophy Dropout Complete -0.1 -0.0 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.2 N.D. +0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.0 -0.0 N.D. +0.3
auxotrophy YNB Glucose +0.1 +0.2 +0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 +0.4 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.4 +0.3 N.D. +0.1
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