Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10334 and 10335 are separated by 303 nucleotides10335 and 10336 are separated by 391 nucleotides10336 and 10337 are separated by 298 nucleotides10337 and 10338 are separated by 365 nucleotides mRNA_1966: 10334 - K09522 DNAJC2 DnaJ homolog subfamily C member 2, at 628,186 to 629,960 10334 mRNA_1967: 10335 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 630,264 to 633,467 10335 mRNA_1968: 10336 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 633,859 to 635,339 10336 mRNA_1969: 10337 - K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1, at 635,638 to 637,721 10337 mRNA_1970: 10338 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 638,087 to 640,268 10338
Group Condition mRNA_1966 mRNA_1967 mRNA_1968 mRNA_1969 mRNA_1970
10334 10335 10336 10337 10338
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.0 -1.9 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 -0.6 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 +0.5 -1.2 +0.2
growth on oleic acid YNB Glucose N.D. -0.2 -0.4 +0.3 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.3 -0.2 +0.2
growth on ypd YPD N.D. +0.2 +0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.3 +0.8 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.6 +0.9 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.2 -0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.2 +0.4 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.1 +0.9 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.4 +0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.2 +0.3 +0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.3 +0.7 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.3 +0.6 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.2 +0.9 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.1 +1.4 +0.2
auxotrophy YNB Glucose N.D. -0.1 +0.2 +1.6 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.4 +0.9 +0.5
auxotrophy Dropout Complete N.D. -0.2 +0.0 +2.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.3 +1.6 +0.5
remove
mRNA_1966
plot
remove
mRNA_1967
plot
remove
mRNA_1968
remove
mRNA_1969
plot
remove
mRNA_1970
plot