Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10341 and 10342 are separated by 226 nucleotides10342 and 10343 are separated by 361 nucleotides10343 and 10344 are separated by 405 nucleotides10344 and 10345 are separated by 173 nucleotides mRNA_1973: 10341 - KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton, at 646,183 to 650,027 10341 mRNA_1974: 10342 - KOG4067 Uncharacterized conserved protein, at 650,254 to 651,223 10342 mRNA_1975: 10343 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 651,585 to 654,888 10343 mRNA_1976: 10344 - Hypothetical Protein, at 655,294 to 656,131 10344 mRNA_1977: 10345 - HMMPfam-Eukaryotic initiation factor 4E-PF01652,SUPERFAMILY--SSF55418, at 656,305 to 657,635 10345
Group Condition mRNA_1973 mRNA_1974 mRNA_1975 mRNA_1976 mRNA_1977
10341 10342 10343 10344 10345
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.3 -0.4 -2.6 N.D.
growth on oleic acid YNB Glucose -0.6 -0.3 +0.0 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.2 -0.3 -1.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.2 -0.2 -0.9 N.D.
growth on ypd YPD -0.3 +0.4 +0.2 -0.8 N.D.
growth on ricinoleic acid YNB Glucose -0.6 -0.7 -0.0 +0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 -0.2 +0.5 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 -0.1 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 -0.3 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.6 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.8 -0.0 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.1 +0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.7 -0.3 +0.9 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 +0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 -0.5 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.6 +0.0 +1.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 -0.3 +0.9 N.D.
auxotrophy Dropout Complete +0.2 +0.2 -0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.4 +0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.4 +0.1 -0.0 N.D.
auxotrophy YNB Glucose +0.2 +0.5 +0.2 +0.4 N.D.
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