Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10343 and 10344 are separated by 405 nucleotides10344 and 10345 are separated by 173 nucleotides10345 and 10346 are separated by 211 nucleotides10346 and 10347 are separated by 406 nucleotides mRNA_1975: 10343 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 651,585 to 654,888 10343 mRNA_1976: 10344 - Hypothetical Protein, at 655,294 to 656,131 10344 mRNA_1977: 10345 - HMMPfam-Eukaryotic initiation factor 4E-PF01652,SUPERFAMILY--SSF55418, at 656,305 to 657,635 10345 mRNA_1978: 10346 - K14409 SMG7, EST1C protein SMG7, at 657,847 to 661,571 10346 mRNA_1979: 10347 - KOG2362 Uncharacterized Fe-S protein, at 661,978 to 663,393 10347
Group Condition mRNA_1975 mRNA_1976 mRNA_1977 mRNA_1978 mRNA_1979
10343 10344 10345 10346 10347
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -2.6 N.D. +1.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.9 N.D. -0.2 +0.3
growth on ypd YPD +0.2 -0.8 N.D. +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.3 N.D. -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.1 N.D. +0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -1.1 N.D. +0.6 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.9 N.D. -1.0 -0.1
growth on oleic acid YNB Glucose +0.0 -0.4 N.D. +0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.4 N.D. +0.5 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.0 N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 N.D. +0.7 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 N.D. +0.6 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.7 N.D. +0.3 -0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.0 N.D. +0.7 -0.0
growth on ricinoleic acid YNB Glucose -0.0 +0.7 N.D. +0.2 -0.1
auxotrophy Dropout Complete -0.1 +0.1 N.D. +1.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.9 N.D. +0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 N.D. +0.6 -0.2
auxotrophy YNB Glucose +0.2 +0.4 N.D. +0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.3 N.D. +0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +1.1 N.D. +0.8 -0.1
remove
mRNA_1975
plot
remove
mRNA_1976
plot
remove
mRNA_1977
remove
mRNA_1978
plot
remove
mRNA_1979
plot