Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10352 and 10353 are separated by 672 nucleotides10353 and 10354 are separated by 1107 nucleotides10354 and 10355 are separated by 690 nucleotides10355 and 10356 are separated by 59 nucleotides mRNA_1984: 10352 - Hypothetical Protein, at 670,630 to 671,905 10352 mRNA_1985: 10353 - Hypothetical Protein, at 672,578 to 672,870 10353 mRNA_1986: 10354 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 673,978 to 676,416 10354 mRNA_1987: 10355 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 677,107 to 679,198 10355 mRNA_1988: 10356 - KOG1674 Cyclin, at 679,258 to 681,059 10356
Group Condition mRNA_1984 mRNA_1985 mRNA_1986 mRNA_1987 mRNA_1988
10352 10353 10354 10355 10356
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. N.D. -0.3 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. N.D. -0.2 -0.2
growth on ypd YPD -0.4 N.D. N.D. +0.4 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. -0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.4 N.D. N.D. +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. N.D. +0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. N.D. -0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 N.D. N.D. -0.6 -0.3
auxotrophy Dropout Complete -0.3 N.D. N.D. +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. N.D. +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. N.D. +0.1 -0.1
auxotrophy YNB Glucose -0.1 N.D. N.D. +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. +0.2 -0.0
growth on ricinoleic acid YNB Glucose +0.1 N.D. N.D. +0.3 -0.2
growth on oleic acid YNB Glucose +0.0 N.D. N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. N.D. +0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. +0.6 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. N.D. +0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. N.D. +0.7 +0.0
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