Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10359 and 10360 are separated by 385 nucleotides10360 and 10361 are separated by 954 nucleotides10361 and 10362 are separated by 523 nucleotides10362 and 10363 are separated by 930 nucleotides mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687,558 to 690,393 10359 mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690,779 to 693,096 10360 mRNA_1993: 10361 - Hypothetical Protein, at 694,051 to 694,539 10361 mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695,063 to 698,759 10362 mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699,690 to 700,377 10363
Group Condition mRNA_1991 mRNA_1992 mRNA_1993 mRNA_1994 mRNA_1995
10359 10360 10361 10362 10363
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 -0.8 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.3 -1.2 N.D. +0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.6 N.D. -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.7 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.5 N.D. +0.2
growth on oleic acid YNB Glucose +0.3 +0.0 -0.0 N.D. -0.6
growth on ricinoleic acid YNB Glucose +0.1 +0.0 -0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.5 -0.3 N.D. +0.1
auxotrophy YNB Glucose -0.1 +0.4 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.4 -0.2 N.D. +0.7
growth on oleic acid YNB Oleic Acid +0.5 +0.0 +0.2 N.D. -0.5
auxotrophy Dropout Complete -0.1 +0.2 +0.4 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.2 +0.7 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 +0.7 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 +0.6 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.6 +0.2 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.0 +0.7 N.D. -0.0
growth on ypd YPD +0.1 -0.1 +1.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.0 +0.9 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +1.3 N.D. +0.4
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