Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10359 and 10360 are separated by 385 nucleotides
10360 and 10361 are separated by 954 nucleotides
10361 and 10362 are separated by 523 nucleotides
10362 and 10363 are separated by 930 nucleotides
mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687,558 to 690,393
10359
mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690,779 to 693,096
10360
mRNA_1993: 10361 - Hypothetical Protein, at 694,051 to 694,539
10361
mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695,063 to 698,759
10362
mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699,690 to 700,377
10363
Group
Condition
mRNA
_1991
mRNA
_1992
mRNA
_1993
mRNA
_1994
mRNA
_1995
10359
10360
10361
10362
10363
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.8
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.3
-1.2
N.D.
+0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.6
N.D.
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.1
-0.7
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.5
N.D.
+0.2
growth on oleic acid
YNB Glucose
+0.3
+0.0
-0.0
N.D.
-0.6
growth on ricinoleic acid
YNB Glucose
+0.1
+0.0
-0.1
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.5
-0.3
N.D.
+0.1
auxotrophy
YNB Glucose
-0.1
+0.4
-0.3
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.4
-0.2
N.D.
+0.7
growth on oleic acid
YNB Oleic Acid
+0.5
+0.0
+0.2
N.D.
-0.5
auxotrophy
Dropout Complete
-0.1
+0.2
+0.4
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.2
+0.7
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.3
+0.1
N.D.
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
+0.7
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.2
+0.6
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.6
+0.2
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.0
+0.7
N.D.
-0.0
growth on ypd
YPD
+0.1
-0.1
+1.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.0
+0.9
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
+1.3
N.D.
+0.4
remove
mRNA_1991
plot
remove
mRNA_1992
plot
remove
mRNA_1993
remove
mRNA_1994
plot
remove
mRNA_1995
plot