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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10360 and 10361 are separated by 954 nucleotides
10361 and 10362 are separated by 523 nucleotides
10362 and 10363 are separated by 930 nucleotides
10363 and 10364 are separated by 219 nucleotides
mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690,779 to 693,096
10360
mRNA_1993: 10361 - Hypothetical Protein, at 694,051 to 694,539
10361
mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695,063 to 698,759
10362
mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699,690 to 700,377
10363
mRNA_1996: 10364 - KOG0379 Kelch repeat-containing proteins, at 700,597 to 701,909
10364
Group
Condition
mRNA
_1992
mRNA
_1993
mRNA
_1994
mRNA
_1995
mRNA
_1996
10360
10361
10362
10363
10364
growth on oleic acid
YNB Glucose
+0.0
-0.0
N.D.
-0.6
-0.6
growth on oleic acid
YNB Oleic Acid
+0.0
+0.2
N.D.
-0.5
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
N.D.
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.6
N.D.
-0.5
+0.3
auxotrophy
YNB Glucose
+0.4
-0.3
N.D.
+0.0
-0.8
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
N.D.
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.5
N.D.
+0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.2
N.D.
+0.8
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.8
N.D.
-0.1
+0.7
auxotrophy
Dropout Complete
+0.2
+0.4
N.D.
-0.1
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.3
N.D.
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
N.D.
+0.7
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.7
N.D.
-0.3
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.7
N.D.
-0.3
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.6
+0.2
N.D.
+0.2
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.6
N.D.
+0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.7
N.D.
-0.0
-0.2
growth on ypd
YPD
-0.1
+1.1
N.D.
+0.1
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
N.D.
+0.5
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.9
N.D.
+0.6
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+1.3
N.D.
+0.4
+0.2
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