Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10364 and 10365 are separated by 600 nucleotides
10365 and 10366 are separated by 487 nucleotides
10366 and 10367 are separated by 451 nucleotides
10367 and 10368 are separated by 236 nucleotides
mRNA_1996: 10364 - KOG0379 Kelch repeat-containing proteins, at 700,597 to 701,909
10364
mRNA_1997: 10365 - KOG0627 Heat shock transcription factor, at 702,510 to 703,691
10365
mRNA_1998: 10366 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 704,179 to 706,336
10366
mRNA_1999: 10367 - Hypothetical Protein, at 706,788 to 707,404
10367
mRNA_2000: 10368 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 707,641 to 708,923
10368
Group
Condition
mRNA
_1996
mRNA
_1997
mRNA
_1998
mRNA
_1999
mRNA
_2000
10364
10365
10366
10367
10368
auxotrophy
Dropout Complete
-0.5
N.D.
-0.4
-2.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
N.D.
+0.2
-2.0
+0.0
auxotrophy
YNB Glucose
-0.8
N.D.
+0.1
-1.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.1
-1.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
+0.0
-1.4
-0.3
growth on oleic acid
YNB Glucose
-0.6
N.D.
-0.0
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
-0.0
-1.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.5
N.D.
-0.2
-0.8
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.5
N.D.
-0.3
-0.5
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
+0.2
-1.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
N.D.
-0.3
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
-0.7
+0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
-0.4
-0.5
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
-0.3
-1.1
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
-0.2
-1.0
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
+0.2
-1.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
N.D.
-0.8
+0.9
-0.1
growth on ypd
YPD
-0.7
N.D.
+0.1
+0.7
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
N.D.
+0.2
+0.3
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
-0.0
+0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.7
N.D.
+0.0
+0.3
-0.1
remove
mRNA_1996
plot
remove
mRNA_1997
plot
remove
mRNA_1998
remove
mRNA_1999
plot
remove
mRNA_2000
plot