Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10364 and 10365 are separated by 600 nucleotides10365 and 10366 are separated by 487 nucleotides10366 and 10367 are separated by 451 nucleotides10367 and 10368 are separated by 236 nucleotides mRNA_1996: 10364 - KOG0379 Kelch repeat-containing proteins, at 700,597 to 701,909 10364 mRNA_1997: 10365 - KOG0627 Heat shock transcription factor, at 702,510 to 703,691 10365 mRNA_1998: 10366 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 704,179 to 706,336 10366 mRNA_1999: 10367 - Hypothetical Protein, at 706,788 to 707,404 10367 mRNA_2000: 10368 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 707,641 to 708,923 10368
Group Condition mRNA_1996 mRNA_1997 mRNA_1998 mRNA_1999 mRNA_2000
10364 10365 10366 10367 10368
auxotrophy Dropout Complete -0.5 N.D. -0.4 -2.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. +0.2 -2.0 +0.0
auxotrophy YNB Glucose -0.8 N.D. +0.1 -1.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.1 -1.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.0 -1.4 -0.3
growth on oleic acid YNB Glucose -0.6 N.D. -0.0 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.0 -1.2 -0.2
growth on oleic acid YNB Oleic Acid -0.5 N.D. -0.2 -0.8 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.5 N.D. -0.3 -0.5 +0.1
growth on ricinoleic acid YNB Glucose -0.3 N.D. +0.2 -1.0 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.3 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.7 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.4 -0.5 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.3 -1.1 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.2 -1.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.2 -1.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.8 +0.9 -0.1
growth on ypd YPD -0.7 N.D. +0.1 +0.7 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.2 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. -0.0 +0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.7 N.D. +0.0 +0.3 -0.1
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