Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10367 and 10368 are separated by 236 nucleotides10368 and 10369 are separated by 113 nucleotides10369 and 10370 are separated by 1684 nucleotides10370 and 10371 are separated by 159 nucleotides mRNA_1999: 10367 - Hypothetical Protein, at 706,788 to 707,404 10367 mRNA_2000: 10368 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 707,641 to 708,923 10368 mRNA_2001: 10369 - Hypothetical Protein, at 709,037 to 710,403 10369 mRNA_2002: 10370 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51971, at 712,088 to 714,509 10370 mRNA_2003: 10371 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 714,669 to 717,655 10371
Group Condition mRNA_1999 mRNA_2000 mRNA_2001 mRNA_2002 mRNA_2003
10367 10368 10369 10370 10371
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.3 -0.3 -0.5 N.D. -2.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 +0.5 N.D. -3.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.2 -0.2 -0.4 N.D. -0.5
auxotrophy Dropout Complete -2.0 -0.1 +0.2 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.4 -0.3 -0.7 N.D. +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 -0.0 -0.2 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.3 N.D. -0.8
auxotrophy YNB Glucose 75mM Methionine -2.0 +0.0 +0.2 N.D. +0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 -0.1 -1.2 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.0 +0.4 +0.2 N.D. -0.3
auxotrophy YNB Glucose -1.1 +0.0 -0.2 N.D. +0.7
growth on ricinoleic acid YNB Glucose -1.0 +0.0 -0.4 N.D. +1.0
growth on oleic acid YNB Oleic Acid -0.8 +0.3 -0.0 N.D. +0.4
growth on oleic acid YNB Glucose -0.7 -0.1 +0.2 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.1 -0.1 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 -0.2 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 -0.3 N.D. +0.6
growth on ypd YPD +0.7 +0.0 +0.2 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.2 +0.4 N.D. +1.6
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.5 +0.2 N.D. +2.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 +0.8 N.D. +1.5
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