Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10377 and 10378 are separated by 351 nucleotides10378 and 10379 are separated by 948 nucleotides10379 and 10380 are separated by 601 nucleotides10380 and 10381 are separated by 264 nucleotides mRNA_2009: 10377 - BLAST ankyrin [Cenococcum geophilum 1.58], at 733,101 to 734,076 10377 mRNA_2010: 10378 - KOG2533 Permease of the major facilitator superfamily, at 734,428 to 736,399 10378 mRNA_2011: 10379 - KOG2533 Permease of the major facilitator superfamily, at 737,348 to 740,033 10379 mRNA_2012: 10380 - K00681 ggt gamma-glutamyltranspeptidase / glutathione hydrolase, at 740,635 to 742,993 10380 mRNA_2013: 10381 - SUPERFAMILY--SSF49899, at 743,258 to 744,708 10381
Group Condition mRNA_2009 mRNA_2010 mRNA_2011 mRNA_2012 mRNA_2013
10377 10378 10379 10380 10381
growth on oleic acid YNB Oleic Acid +0.1 -0.3 -0.0 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 -0.1 -0.4 +0.1
growth on oleic acid YNB Glucose +0.0 -0.2 +0.1 -0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.3 +0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 +0.0 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 -0.6 -0.2 -0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 -1.0 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose +0.5 +0.0 -0.1 -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.1 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.4 +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 -0.0 +0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.4 -0.1 -0.2 +0.0
auxotrophy Dropout Complete +1.1 +0.1 +0.0 -0.5 -0.3
growth on ypd YPD +0.6 -0.0 +0.2 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 +0.2 +0.4 -0.2
auxotrophy YNB Glucose +0.9 -0.0 +0.1 -0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.2 +0.3 +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.1 +0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +1.2 +0.1 -0.0 -0.0 +0.1
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