Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10379 and 10380 are separated by 601 nucleotides
10380 and 10381 are separated by 264 nucleotides
10381 and 10382 are separated by 707 nucleotides
10382 and 10383 overlap by 10 nucleotides
mRNA_2011: 10379 - KOG2533 Permease of the major facilitator superfamily, at 737,348 to 740,033
10379
mRNA_2012: 10380 - K00681 ggt gamma-glutamyltranspeptidase / glutathione hydrolase, at 740,635 to 742,993
10380
mRNA_2013: 10381 - SUPERFAMILY--SSF49899, at 743,258 to 744,708
10381
mRNA_2014: 10382 - K20697 GNBP1 gram-negative bacteria-binding protein 1, at 745,416 to 747,550
10382
mRNA_2015: 10383 - Hypothetical Protein, at 747,541 to 748,131
10383
Group
Condition
mRNA
_2011
mRNA
_2012
mRNA
_2013
mRNA
_2014
mRNA
_2015
10379
10380
10381
10382
10383
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.5
-0.2
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.5
-0.2
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.5
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
-0.3
-0.2
-0.0
growth on oleic acid
YNB Glucose
+0.1
-0.6
-0.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.3
-0.4
+0.0
-0.1
auxotrophy
Dropout Complete
+0.0
-0.5
-0.3
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
+0.1
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
-0.2
+0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.4
-0.1
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
+0.0
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
-0.2
+0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
-0.1
-0.1
+0.1
growth on ypd
YPD
+0.2
-0.3
+0.1
+0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.1
-0.1
+0.2
-0.0
auxotrophy
YNB Glucose
+0.1
-0.2
+0.0
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.4
-0.2
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
+0.1
+0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.2
-0.3
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.1
-0.2
+0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.4
-0.2
+0.2
+0.4
remove
mRNA_2011
plot
remove
mRNA_2012
plot
remove
mRNA_2013
remove
mRNA_2014
plot
remove
mRNA_2015
plot